| Invitation | Program | InvitedSpeakers | Submission | Registration | General Info | Documents | |||||||||
International WorkshopIntegrative BioinformaticsComplex Metabolic Networks |
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| Bielefeld, July 4th - 5th, 2005 | ||||
Preliminary Program:
| Monday, 4th of July (Room W0-135) | ||||
| 8.30 | Registration |
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| 9.00 | Opening and Welcome |
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| Databases and Integration |
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| 9.15 | Invited talk Integrative Bioinformatics: A Big Challenge for Life Sciences H. Thiele (Bruker Daltonik GmbH, Germany) |
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| 9.55 | Integrating XML based Life Sciences Data Using XML R. Eckstein, S. Heymann, A. Grünewald (Humboldt University Berlin, Germany) |
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| 10.20 | Data relationship mining in life science databases M. Lange, N. Sreenivasulu, A. Stephanik, U. Scholz (IPK-Gatersleben, Germany) |
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| 10.45 | Coffee | |||
| 11.00 | Managing Evidence Derived from Multiple Gene Finding Resources via an XML-based Integration Architecture A. Malousi, V. Koutkias, I. Chouvarda, N. Maglaveras (Aristotle University of Thessaloniki, Greece) |
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| 11.25 | Integration of Data and Resources using Industry-Standard Web Services: The HOBIT Project V. Stuempflen (GSF-Neuherberg, Germany) |
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| 11.50 | A system for integrative and post-planned analysis of 2DE centered proteomics data J. Wang, C. Caron, A. Trubuil (INRA-Jouy-en-Josas, France) |
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| 12.15 | Lunch | |||
| Metabolic Networks |
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| 14.00 | Modules, Motifs, Internal and External Sensing and Global Properties of The Transcriptional and Regulatory Network of Escherichia coli K-12 J. Collado-Vides (UNAM, Mexico) |
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| 14.40 | Kinetic models for metabolic pathways C. K. Mitra (Hyderabad, India) |
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| 15.05 | Dynamic Network Reconstruction from Gene Expression Data Describing LiCl-dependent Induction of Glutamine Synthetase in Hepatocytes S. Zellmer, W. Schmidt-Heck, F. Gaunitz, A. Baldysiak-Figiel, R. Guthke, R. Gebhardt (Leipzig University, Germany) |
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| 15.30 | Coffee | |||
| 15.45 | Creating an information system to maintain and analyse biochemical interaction networks H. Dach, K. Kumpf, M. Hofmann, R. Manthey, J. Fluck (Fraunhofer Institute SCAI, Germany) |
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| 16.10 | Using Gene networks to drug target identification Z. Jiang, Y. Zhou (University of HuaZhong Science and Technology, China) |
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| 16.35 | A structural keystone for drug design K. Rother, M. Dunkel, E. Michalsky, U. Leser, R. Preissner (Charité Universitätsmedizin Berlin, Germany) |
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| 17.00 | Structure / function analysis of lipoprotein lipase by the informational spectrum method S. Glisic, N. Veljkovic, V. Perovic, P. Arrigo (Institute of Nuclear Sciences VINCA, Serbia & Montenegro) |
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| Tuesday, 5th of July (Room W0-135) |
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| Visualization | ||||
| 9.00 | Invited Talk Towards modelling whole organisms - do we have the tools and methods to do this yet? J. Koehler, C. Rawlings, P. Verrier (Rothamsted Research, Great Britain) |
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| 9.40 | Towards Automatic Segmentation of High-Resolution Images of Cross-Sections of Seeds C. Brüß, M. Strickert, U. Seiffert (IPK-Gatersleben, Germany) |
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| 10.05 | Xanvi - An Extensible System for the Visualization and Analysis of Biological Networks J. Griebsch, A. Buchner (Technische Universität München, Germany) |
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| 10.30 | Coffee | |||
| Sequence Analysis and Strucures I and II |
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| 10.45 | Gene Prediction by Syntenic Multiple Alignment S. S. Adi, C. E. Ferreira (IME-USP, Brazil) |
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| 11.10 | Mimiking protein surfaces in silicio E. Michalsky, I. S. Jaeger, A. Goede, R. Preissner (Charité Berlin, Germany) |
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| 11.35 | Identification of embryo specific human isoforms using a database of predicted alternative splice forms H. Pospisil (University of Hamburg, Germany) |
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| 12.00 | Lunch and Poster Session | |||
| 13.15 | Invited Talk Systems Biology of Segment Determination M. Samsonova (St. Petersburg State Polytechnical University, Russia) |
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| 13.55 | SyBME - A Systems Biology Modelling Environment B. Junker, D. Koschuetzki, F. Schreiber (IPK-Gatersleben, Germany) |
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| Medical Bioinformatics |
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| 14.20 | Modelling epidermal homeostasis on the cellular level N. Grabe, K. Neuber (University of Hamburg, Germany) |
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| 14.45 | Predictive Clustering Trees for the Integrated Analysis of Gene Expression and Clinical Data U. Hahn, S. Kramer (FH Weihenstephan, Germany) |
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| 15.10 | Coffee | |||
| 15.25 | Oncology over Internet: integrating data and analysis of oncology interest on the net by means of workflows P. Romano, G. Bertolini, F. De Paoli, M. Fattore, D. Marra, G. Mauri, E. Merelli, I. Porro, S. Scaglione, L. Milanesi (National Cancer Research Institute, Italy) |
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| 15.50 | Combining clinical and pathological features with molecular data of genetic disorders T. Toepel (Bielefeld University, Germany) |
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| 16.25 | Final Discussion | |||