Modultitel
- Informationssysteme in der molekularen Bioinformatik
Lehrveranstaltungen des Moduls
- Webbasierte Informationssysteme (2V + 2Ü)
- Programmierpraktikum (4Pr)
Modulverantwortliche(r)
Journals
Journal of Biomedical Informaticshttp://www.journals.elsevier.com/journal-of-biomedical-informatics/
International Journal of Medical Informatics
http://www.journals.elsevier.com/international-journal-of-medical-informatics/
Computer Methods and Programs in Biomedicine
http://www.journals.elsevier.com/computer-methods-and-programs-in-biomedicine/
Computers in Biology and Medicine
http://www.journals.elsevier.com/computers-in-biology-and-medicine/
Computer Methods and Programs in Biomedicine
http://www.elsevier.com/wps/find/journaldescription.cws_home/505960/description
Artificial Intelligence in Medicine
http://www.journals.elsevier.com/artificial-intelligence-in-medicine/
Informatics for Health and Social Care
http://informahealthcare.com/loi/mif
Journal of Medical Internet Research
http://www.jmir.org
GMS Medizinische Informatik, Biometrie und Epidemiologie
http://www.egms.de/dynamic/en/journals/mibe/index.htm
GMS German Medical Science — an Interdisciplinary Journal
http://www.egms.de/static/de/journals/gms/
Methods of Information in Medicine
http://www.schattauer.de/en/magazine/subject-areas/journals-a-z/methods.html
Literatur
Cynthia Gibas und Per Jambeck: Bioinformatics Computer Skills. OReilly 2001Akmal Chaudhri et al.: XML Data Management. Addison-Wesley 2003
Peter Haas: Medizinische Informationssysteme und elektronische Krankenakten. Springer Verlag, Berlin 2004
J. Hohmeiser und M. Willis: Molecular and Translational Vascular Medicine. Humana Press 2008
J. Hegewald: Informationsintegration in Biodatenbanken. Vieweg-Teubner Verlag 2009
Elmasri, Navathe: Grundlagen von Datenbanksystemen; Pearson Studium
H.J. Böhm, G. Klebe und H. Kubinyi: Wirkstoffdesign. Spektrum Akademischer Verlag 2002
Links
Datenintegration:- Pedant-Pro™ Sequence Analysis Suite
http://www.biomax.com/products/pedantpro.php - SRS – specialist life science data integration
http://www.biowisdom.com/2009/12/srs/
- MARG: Modelling and Animation of Regulatory Gene Networks
http://www.techfak.uni-bielefeld.de/ags/bi/research/marg/index.shtml - MoVisPP: A web-based tool to model and visualise biochemical pathways using Petri Nets
http://agbi.techfak.uni-bielefeld.de/movispp/ - BioPNML: BioPNML (Biology Petri Net Markup Language) is an attempt to create an extensible DTD for the annotation of biological Petri net modeling.
http://www.techfak.uni-bielefeld.de/~mchen/BioPNML/ - RAMEDIS: Rare Metabolic Diseases Database
http://www.ramedis.de/ - CardioWorkBench: Drug Design for Cardiovascular Diseases
http://www.cardioworkbench.eu/ - Cellmicrocosmos: An interactive stereoscopic visualization of biological cells
http://www.cellmicrocosmos.org - VANESA: Visualization and Analysis of Networks in System Biology Applications
http://vanesa.sourceforge.net/ - PathAligner: Metabolic Pathway Retrieval and Alignment
http://bibiserv.techfak.uni-bielefeld.de/pathaligner/ - VINEdb: Visualization Integration Network Exploration
http://agbi.techfak.uni-bielefeld.de/VINEdb/ - Expertensystem Brutlag
http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.33.4747
- Game of Life
http://www.bitstorm.org/gameoflife/ - L-Systeme
www.generation5.org/content/2002/lse.asp
http://www.iwr.uni-heidelberg.de/groups/ngg/People/schuai/ - PIPE 2
http://pipe2.sourceforge.net/ - Renew
http://www.renew.de/ - Gepasi
http://www.gepasi.org/ - Jarnac
http://sys-bio.org/sample-page/ - DBSolve
http://insysbio.ru/index.php?option=com_content&task=view&id=75&Itemid=99&lang=en
http://www.biomedcentral.com/1752-0509/4/109 - E-Cell
http://www.e-cell.org/ecell/
- EMBL Genbank
http://www.ebi.ac.uk/ena - Enzyme
http://enzyme.expasy.org/ - GO
http://amigo.geneontology.org/cgi-bin/amigo/go.cgi - MINT
http://mint.bio.uniroma2.it/mint/Welcome.do - PubChem
http://pubchem.ncbi.nlm.nih.gov/ - SCOP
http://scop.mrc-lmb.cam.ac.uk/scop/ - Reactome
http://www.reactome.org/ReactomeGWT/entrypoint.html - TRANSFAC®
http://www.biobase-international.com/product/transcription-factor-binding-sites - PROTEOME
http://www.biobase-international.com/product/proteome - RegulonDB
http://regulondb.ccg.unam.mx - BRENDA
http://www.brenda-enzymes.org/ - KEGG
http://www.genome.jp/kegg/ - Swiss-Prot
www.ebi.ac.uk/swissprot/ - PDB
http://www.rcsb.org/pdb/home/home.do - CSNDB
http://geo.nihs.go.jp/csndb/ - WIT(ERGO)
https://ergo.integratedgenomics.com - OMIM
http://www.ncbi.nlm.nih.gov/omim - Metagene
http://www.metagene.de - ASDB
http://cbcg.nersc.gov/asdb - ROTE LISTE®
http://www.rote-liste.de/ - Scholz-Datenbank
http://www.scholz-datenbank.de/ - STCDB
http://bibiserv.techfak.uni-bielefeld.de/stcdb - IntAct
http://www.ebi.ac.uk/intact/
- bioinformatik.de: A Yahoo-like Webdirectory for bioinformatics.
http://www.bioinformatik.de - BioCarta: Brings you the Pathways and the Tools to study them.
http://www.biocarta.com - PNML
http://www.informatik.hu-berlin.de/top/pnml/ - Metanet
Interactive Modelling and Simulation of Biochemical Networks - JUNG
http://jung.sourceforge.net/
