Modultitel
- Interdisziplinäre ZellVisualisierung
Lehrveranstaltungen des Moduls
- Interdisziplinäre ZellVisualisierung (SS: 2V)
- Projekt CELLmicrocosmos Cell Modeling (4Pj)
- Seminar Cell Visualization (SS: 2S) oder
- Seminar Stereoscopic 3D Visualization (WS: 2S)
Modulverantwortliche(r)
Journals
Bioinformatics (Oxford)http://bioinformatics.oxfordjournals.org
BMC Bioinformatics
http://www.biomedcentral.com/bmcbioinformatics/
Journal of Chemical Information and Modeling
http://pubs.acs.org/journal/jcisd8
Journal of Cheminformatics
http://www.jcheminf.com
Journal of Integrative Bioinformatics
http://journal.imbio.de
Journal of Molecular Modeling
http://www.springer.com/chemistry/journal/894
Literatur
- Bruce A, Johnson A, Lewis J, Raff M, Roberts K, Walter P, Molecular Biology of the Cell, 2002
- Cooper GM, Hausman RE, The Cell: A Molecular Approach, 2007
- Luckey M, Membrane Structural Biology, 2008
- Voet D, Voet JG, Pratt CW, Fundamentals of Biochemistry: Life at the Molecular Level, 2006
- Ware C, Information Visualization, 2004
Links
Tools:- CELLmicrocosmos 2 MembraneEditor: Modeling, Visualization and Analysis of PDB-based Membranes
http://Cm2.CELLmicrocosmos.org - CELLmicrocosmos 4 PathwayIntegration: Localization and Visualization of Protein-Interaction Networks in a Virtual Cell
http://Cm4.CELLmicrocosmos.org - DAWIS-M.D. - Bioinformatics Data Warehouse Information System
http://agbi.techfak.uni-bielefeld.de/DAWISMD/ - HIVE (Handy Integration and Visualisation of multimodal Experimental Data, Vanted Plugin)
http://vanted.ipk-gatersleben.de/addons/hive/download_installation.html - PathAligner: Metabolic Pathway Retrieval and Alignment
http://bibiserv.techfak.uni-bielefeld.de/pathaligner/ - VANESA: Visualization and Analysis of Networks in System Biology Applications
http://vanesa.sourceforge.net/ - VCell - The Virtual Cell
http://www.nrcam.uchc.edu - VINEdb: Visualization Integration Network Exploration
http://agbi.techfak.uni-bielefeld.de/VINEdb/
- Enzyme
http://enzyme.expasy.org/ - GO
http://amigo.geneontology.org/cgi-bin/amigo/go.cgi - Reactome
http://www.reactome.org/ReactomeGWT/entrypoint.html - BRENDA
http://www.brenda-enzymes.org/ - KEGG
http://www.genome.jp/kegg/ - PDB
http://www.rcsb.org/pdb/home/home.do - UniProt
http://www.uniprot.org/