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2011
- B. Kormeier, K. Hippe & R. Hofestädt. Data Warehouses in Bioinformatics: Integration of Molecular Biological Data. it - Information Technology, 53(5) 241-249, 2011
- M. Lange, J. Chen, D. Borck, C. Colmsee, K. Hippe, B. Kormeier, S. Weise and U. Scholz. The LAILAPS Information Retrieval Portal as Scalable and Integrative Database Query Endpoint. Proceedings of the 6th International Symposium on Health Informatics and Bioinformatis
2011, pp. 37
- M. Lange, J. Chen, D. Borck, C. Colmsee, K. Hippe, B. Kormeier, S. Weise and U. Scholz. Building Information Retrieval Portals using the lailaps search engine. Proceedings of the 6th International Symposium on Health Informatics and Bioinformatis
2011, pp. 90
(Poster Abstract)
- B. Kormeier, T. Töpel and R. Hofestädt. DAWIS-M.D. 2.0: A Data Warhouse Information System for Metabolic Data. In Poster Abstracts of the 7th International Symposium on Integrative Bioinformatics (IB 11) , Wageningen University, The Netherlands, March 21 - 23, 2011.
(Poster Abstract)
2010
- Björn Sommer, Evgeny S. Tiys, Benjamin Kormeier, Klaus Hippe, Sebastian Janowski, Timofey V. Ivanisenko, Anatoly O. Bragin, Patrizio Arrigo, Pavel S. Demenkov, Alexey V. Kochetov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov and Ralf Hofestädt. Visualization and Analysis of a Cardio Vascular Disease- and MUPP1-related Biological Network combining Text Mining and Data Warehouse Approaches. Journal of Integrative Bioinformatics, 7(1):148, 2010.
- Benjamin Kormeier, Klaus Hippe, Patrizio Arrigo, Thoralf Töpel, Sebastian Janowski and Ralf Hofestädt. Reconstruction of biological networks based on life science data integration. Journal of Integrative Bioinformatics, 7(2):146, 2010.
- Klaus Hippe, Benjamin Kormeier, Thoralf Töpel, Sebastian Janowski and Ralf Hofestädt: DAWIS-M.D. - A Data Warehouse System for Metabolic Data. GI Jahrestagung (2) 2010: 720-725
- Benjamin Kormeier, Klaus Hippe, Thoralf Töpel and Ralf Hofestädt. CardioVINEdb: a data warehouse approach for integration of life science data in cardiovascular diseases. Journal of Integrative Bioinformatics, 7(1):142, 2010.
- S. Janowski, B. Kormeier, T. Töpel, K. Hippe, R. Hofestädt, N. Willassen, R. Friesen, S. Rubert, D. Borck, P. Haugen and M. Chen. Modeling of cell-cell communication processes using Petri nets in the example of quorum sensing, In Silico Biology 10, 0003 (2010).
- B. Sommer, J. Künsemöller, N. Sand, A. Husemann, M. Rumming, B. Kormeier. CELLmicrocosmos 4.1: An interactive approach to integrating spatially localized metabolic networks into a virtual 3D cell environment (Short Paper). In Proceedings of BIOSTEC Bioinformatics 2010.
2009
- B. Kormeier, K. Hippe, T. Töpel, and R. Hofestädt. Cardiovinedb: a data warehouse approach for integration of life science data in cardiovascular diseases. In Im Focus das Leben. Beiträge der 39. Jahrestagung der Gesellschaft für Informatik e.V. (GI), pages 40,704-708, Bonn, 2009. S. Fischer et al. (Hrsg.), INFORMATIK 2009, Koellen Druck+Verlag.
- B. Kormeier, S. Janowski, T. Toepel, K. Hippe, P. Arrigo, and R. Hofestaedt. Reconstruction of networks based on life science data integration. In 2009 International Workshop on Computational and Integrative Biology, Hangzhou, China, September 18-20, 2009.
- M. Chen, S. Hariharaputran, R. Hofestädt, B. Kormeier, and S. Spangardt. Petri net models for the semi-automatic construction of large scale biological networks. Natural Computing, page 63, 2009.
2008
- T. Töpel, B. Kormeier, A. Klassen, and R. Hofestädt. Biodwh: A data warehouse kit for life science data integration. Journal of Integrative Bioinformatics - JIB, 5(2):93, 2008.
- S. Hariharaputran, R. Hofestädt, B. Kormeier, S. Spangardt. Modelling and Visualisation of Pathways using Petri Nets. In Proceedings of the 5th International Symposium on Integrative Bioinformatics, Wittenberg, Germany, August 20 - 22, 2008.
(Poster Abstract)
- S. Hariharaputran, R. Hofestädt, B. Kormeier, S. Spangardt. MOdeling and VIsualisation of Pathways using Petri Nets. In Proceedings of the Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2008), Novosibirsk, Russia, June 22-28, 2008.
(Poster Abstract)
2007
- B. Kormeier, T. Töpel and R. Hofestädt. BioDWH: A general data warhouse approach for life science data integration. In Poster Abstracts of the 4rd Integrative Bioinformatics Workshop (IB 07) , University of Ghent, Belgium, September 10 - 12, 2007.
(Abstract)
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