University of Bielefeld
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Faculty of Technology
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Practical
Computer Science/Bioinformatics
Jens Reeder
Technische Fakultät
Universität Bielefeld
Postfach 10 01 31
D-33501 Bielefeld
Germany
room: M3-114
phone: +49-521-106-2903
fax: +49-521-106-6411
email: jreeder(at)techfak.uni-bielefeld.de
Projects
Publications
- Jens Reeder, Peter Steffen, and Robert Giegerich.
pknotsRG: RNA pseudoknot folding including near-optimal structures
and sliding windows. Nucleic Acids Research, 35(suppl_2):
W320--324, 2007.
- Janina Reeder, Jens Reeder, and Robert Giegerich.
Locomotif: From graphical motif description to RNA motif search.
Bioinformatics, 23(13): i392--400, 2007.
- Reeder, Jens and Höchsmann, Matthias and Rehmsmeier, Marc and
Voß, Björn and Giegerich, Robert:
Beyond
Mfold:Recent advances in RNA bioinformatics in Journal of
Biotechnology, 2006.
- Steffen, Peter and Voß, Björn and Rehmsmeier, Marc and
Reeder, Jens and Giegerich, R.:
RNAshapes: an integrated RNA analysis package based on abstract
shapes in Bioinformatics, 2006.
- Reeder, Jens and Giegerich, Robert:
Consensus shapes: an alternative to the Sankoff algorithm for RNA
consensus structure prediction in Bioinformatics, 2005.
- Reeder, Jens and Giegerich, Robert:
Design, implementation and evaluation of a practical pseudoknot
folding algorithm based on thermodynamics in BMC
Bioinformatics, 2004.
Teaching
WS 07/08:
SS 07:
WS 06/07:
SS 06:
WS 05/06:
SS 05:
WS04/05:
SS 04:
WS 03/04:
Jens Reeder - 17.11.2007