Publications of Dipl. Inform. Michael Beckstette

Publications in Journals and peer-reviewed Proceedings

	Calin O. Marian , Stefano J. Bordoli , Marion Goltz , Rachel A. Santarella , Leisa P. Jackson , Olga Danilevskaya , Michael Beckstette , Robert Meeley , and Hank W. Bass The Maize Single myb histone 1 Gene, Smh1, Belongs to a Novel Gene Family and Encodes a Protein That Binds Telomere DNA Repeats in Vitro In Plant Physiol. 133: 1336-1350; 2003
	Michael Beckstette, Stefan Kurtz, and Robert Giegerich Efficient Matching of Position Specific Scoring Matrices on Genomic Scale Data using Extended Suffix Arrays. In Proceedings of the 2nd. International Bioinformatics Research and Education Workshop, BREW, Bielefeld,Germany, 2003.
	Michael Beckstette, Alexander Sczyrba, Paul M. Selzer Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, pages 179-186, ISBN 3-88579-382-2
	Michael Beckstette, Dirk Strothmann, Robert Homann, Robert Giegerich and Stefan Kurtz PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, pages 53-64, ISBN 3-88579-382-2
	Alexander Sczyrba, Michael Beckstette, Robert Giegerich, and Curtis R. Altmann Identification of 10,500 Xenopus laevis Full Length Clones through EST Clustering and Sequence Analysis In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, ISBN 3-88579-382-2
	Michael Beckstette*, Jens Mailänder*, Richard Marhöfer, Alexander Sczyrba, Enno Ohlebusch, Robert Giegerich, and Paul M. Selzer Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics Journal of Integrative Bioinformatics (JIB) 8, (1), 2004
	Alexander Sczyrba*, Michael Beckstette*, Ali H. Brivanlou, Robert Giegerich, and Curtis R. Altmann XenDB: Full Length cDNA Prediction and Cross Species Mapping in Xenopus laevis BMC Genomics 2005, 6:123
	Michael Beckstette, Robert Homann, Robert Giegerich, and Stefan Kurtz Fast index based algorithms and software for matching position specific scoring matrices BMC Bioinformatics 2006, 7:389
	*) joint first authors

Other Publications

	He Y. Quin S., Pan X.M., Beckstette M., Giegerich R. Using protein secondary structure predicition to build structural template CASP6 method paper, 2004	HTML
	Michael Beckstette, Jens Mailänder, Robert Giegerich, and Paul M. Selzer G-enlight: A system for interactive high-throughput sequence analysis and (differential) comparative genomics Poster presented at: 9th Pacific Symposium on Biocomputing, Lihue, USA, 2003.

	Michael Beckstette Implementierung effizienter atomarer Matcher mit Suffixbäumen. Diploma thesis (available only in German),Practical Computer Science group, Bielefeld University, 2001