Publications of Dipl. Inform. Michael Beckstette

Publications in Journals and peer-reviewed Proceedings

BibTeXCalin O. Marian , Stefano J. Bordoli , Marion Goltz , Rachel A. Santarella , Leisa P. Jackson , Olga Danilevskaya , Michael Beckstette , Robert Meeley , and Hank W. Bass
The Maize Single myb histone 1 Gene, Smh1, Belongs to a Novel Gene Family and Encodes a Protein That Binds Telomere DNA Repeats in Vitro
In Plant Physiol. 133: 1336-1350; 2003
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BibTeXMichael Beckstette, Stefan Kurtz, and Robert Giegerich
Efficient Matching of Position Specific Scoring Matrices on Genomic Scale Data using Extended Suffix Arrays.
In Proceedings of the 2nd. International Bioinformatics Research and Education Workshop, BREW, Bielefeld,Germany, 2003.
BibTeXMichael Beckstette, Alexander Sczyrba, Paul M. Selzer
Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics
In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, pages 179-186, ISBN 3-88579-382-2
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BibTeXMichael Beckstette, Dirk Strothmann, Robert Homann, Robert Giegerich and Stefan Kurtz
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, pages 53-64, ISBN 3-88579-382-2
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BibTeXAlexander Sczyrba, Michael Beckstette, Robert Giegerich, and Curtis R. Altmann
Identification of 10,500 Xenopus laevis Full Length Clones through EST Clustering and Sequence Analysis
In Proceedings of the German Conference on Bioinformatics GCB, 2004; GI-Edition, Lecture Notes in Informatics, P-53, ISBN 3-88579-382-2
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BibTeXMichael Beckstette*, Jens Mailänder*, Richard Marhöfer, Alexander Sczyrba, Enno Ohlebusch, Robert Giegerich, and Paul M. Selzer
Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics
Journal of Integrative Bioinformatics (JIB) 8, (1), 2004
BibTeXAlexander Sczyrba*, Michael Beckstette*, Ali H. Brivanlou, Robert Giegerich, and Curtis R. Altmann
XenDB: Full Length cDNA Prediction and Cross Species Mapping in Xenopus laevis
BMC Genomics 2005, 6:123
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BibTeXMichael Beckstette, Robert Homann, Robert Giegerich, and Stefan Kurtz
Fast index based algorithms and software for matching position specific scoring matrices
BMC Bioinformatics 2006, 7:389
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*) joint first authors

Other Publications

BibTeXHe Y. Quin S., Pan X.M., Beckstette M., Giegerich R.
Using protein secondary structure predicition to build structural template
CASP6 method paper, 2004
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BibTeXMichael Beckstette, Jens Mailänder, Robert Giegerich, and Paul M. Selzer
G-enlight: A system for interactive high-throughput sequence analysis and (differential) comparative genomics
Poster presented at: 9th Pacific Symposium on Biocomputing, Lihue, USA, 2003.
BibTeXMichael Beckstette
Implementierung effizienter atomarer Matcher mit Suffixbäumen.
Diploma thesis (available only in German),Practical Computer Science group, Bielefeld University, 2001

gk635www@techfak.uni-bielefeld.de 11.07.2003