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ObjectLoci
public class Loci
Nested Class Summary | |
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static class |
Loci.Footer
|
static class |
Loci.Header
|
static class |
Loci.Locus
|
static class |
Loci.LocusData
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static class |
Loci.LocusDataAffectionStatus
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static class |
Loci.LocusDataComplexAffection1
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static class |
Loci.LocusDataComplexAffection2
|
static class |
Loci.LocusDataNumberedAlleles
|
Method Summary | |
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int |
diseaseLocusChromoOrd()
Return 0 based Chromosome Order of disease locus. |
int |
diseaseLocusInputOrd()
Return 0 based Input Order of disease locus. |
Loci.Footer |
footer()
|
int |
getChromoOrd_ChangingS1()
Returns the 0 based Chromosome Order of the recom locus where the cpt of s will change (e.g. |
int |
getChromoOrd_ChangingS2()
Returns the 0 based Chromosome Order of the recom locus where the cpt of s will change (e.g. |
Loci.Header |
header()
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Loci.Locus |
loci(int i)
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static Loci |
readLoci(BufferedReader in)
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static Loci |
readLoci(File file)
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static Loci |
readLoci(String file)
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String |
toString()
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Methods inherited from class Object |
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equals, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Method Detail |
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public Loci.Header header()
public Loci.Locus loci(int i)
public Loci.Footer footer()
public int diseaseLocusChromoOrd()
public int diseaseLocusInputOrd()
public String toString()
toString
in class Object
public int getChromoOrd_ChangingS1()
public int getChromoOrd_ChangingS2()
public static Loci readLoci(String file) throws IOException
IOException
public static Loci readLoci(File file) throws IOException
IOException
public static Loci readLoci(BufferedReader in) throws IOException
IOException
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